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Q: cancer1 ( Answered,   0 Comments )
Question  
Subject: cancer1
Category: Science > Biology
Asked by: jimmy1978-ga
List Price: $30.00
Posted: 04 Dec 2002 13:51 PST
Expires: 03 Jan 2003 13:51 PST
Question ID: 119302
1.  The COS-1 cell line, which was derived from the kidneys of
Cercopithecus aethiops or African Green monkey, is commonly utilized
in cases where transfection of plasmids is required for various
purposes.  Unlike some cell lines used for this purpose (HeLa for
example), COS-1 is not a tumor cell, but was "transformed" into a
continuously growing cell line by the addition of an origin defective
mutant of the SV-40 virus.  The SV-40 virus codes for a protein known
as Large T-antigen, which binds to the retinoblastoma protein, thus
interfering with its binding to the E2F transcription factors. 
Deletion studies of this phenomenon reveal that you can remove the
domains of the protein that are needed for RB to be phosphorylated in
a cell cycle dependent manner, yet still retain the ability to bind to
Large T-antigen.

A.   What effect does Large-T-antigen exert on the cell cycle, and
what would be the probable mode of action to exert this effect?

B.  Propose a detailed RB:T-antigen protein model to explain why this
is possible?  How would you determine which domain/region of the RB
protein was involved in binding to the SV-40 Large T antigen?

C.  From the standpoint of a cell biologist studying promoter/enhancer
functions of various genes in COS-1 cells, cite an advantage and a
disadvantage to using this cell line for such experiments, remembering
that Large-T-antigen lurks within?
Answer  
Subject: Re: cancer1
Answered By: synarchy-ga on 07 Dec 2002 05:28 PST
 
Hi -

A) Growth/mitogenic factors are normally necessary in order for a cell
to enter mitosis (G1 phase in this case).  Upon growth factor receptor
binding a signaling cascade leads to phosphorylation of Rb. 
Phosphorylation of Rb inactivates the protein.  Inactivation of Rb
removes a restriction on mitosis and allows a cell to begin
replication (removes the G1 phase restriction point).  Similarly,
binding of SV40 T-ag to Rb inactivates the protein and allows the cell
to progress to mitosis in the absence of mitogenic factors.  This is
accomplished by inactive Rb releasing E2F which functions as a
transcription factor to initiate the process of mitosis
(overexpressing E2F can also force this restriction point by
overwhelming the amount of available Rb).

A reasonable powerpoint show describing the cell-cycle and the role of
oncogenes - a little light on the description of Rb/Sv-40
http://www.tufts.edu/med/biochemistry/faculty/yee/material/RB_lecture.ppt

A nice review article detailing the cell-cycle and the roles played by
Rb, E2F, and SV-40 can be found here:
http://www.landesbioscience.com/journals/cellcycle/papersinpress/1.6/cc07250254.html

B)  T-Ag binds to the same "pocket domain" in Rb as does E2F -
therefore T-Ag blocks the ability of Rb to sequester and inhibit the
E2F transcription factors.

A general page describing Rb/SV40 T-Ag interactions:
://www.google.com/search?hl=en&lr=&ie=UTF-8&oe=UTF-8&q=binding+sv40+Rb

A brief description of this can be found in the small print on this
page:
http://www.researchd.com/miscabs/sv40ab.htm

The simplest way to determine which region of the RB protein binds to
T-Ag would be to express a series of truncation mutants of the RB
protein (one series sequentially removing sections of the N terminus
and another series sequentially removing sections of the C terminus)
and see which regions are necessary for protein binding (usally done
by expressing tagged RB constructs which can be immobilized to a
column over which is flowed T-Ag.  The amount of unbound versus bound
T-Ag will help you determine the affinity of binding (if any) to
T-Ag).

C) The largest complication that you would expect in using Cos-1 cells
is that the e2f transcription factors will be deregulated due to the
interference of T-Ag with Rb mediated transcription.  Therefore one
disadvantage to using this cell line is that genes which are
transactivated by e2f transcription factors are likely to be
disregulated.  An advantage of this cell line reads in much the same
fashion - by disregulating the e2f transcription factors, it would be
possible to study the effect of other transcription factors in the
regulation of target genes without interference from the e2f factors.


Please let me know if you require further details/explanations.


Search strategy:
Google: sv40 cell-cycle mechanism
Google: sv40 Rb binding

Clarification of Answer by synarchy-ga on 07 Dec 2002 05:35 PST
Sorry -

Revision of part C)

Since the T-Ag will be bound to Rb and E2F will be free to
transactivate in COS-1 cells, the cells would be useful for studying
the effects of E2F mediated transcription as the E2F factors will be
constituitively active.  A disadvantage would be that E2F will be
constituitively active and other factors which may involved in the
transcription of a target gene will be masked by the activity of E2F. 
Additionally, as the cells will be constantly progressing through
mitosis, genes expressed during G0 may not be evident.

Request for Answer Clarification by jimmy1978-ga on 07 Dec 2002 12:04 PST
hi synarcy
as you write that ,i need more information about that .if you don't
mine.give me response ass soon as possible.
jimmy

Clarification of Answer by synarchy-ga on 07 Dec 2002 12:30 PST
Which part in particular would you like explained more?

Request for Answer Clarification by jimmy1978-ga on 07 Dec 2002 15:34 PST
hi synarchy 
i would need more information on part -a and part b.
jimmy

Clarification of Answer by synarchy-ga on 08 Dec 2002 08:51 PST
I will revise and expand both parts shortly.

Clarification of Answer by synarchy-ga on 09 Dec 2002 08:56 PST
A)  Cells transformed by SV40 Large T-Ag exhibit uncontrolled mitosis
and do not require mitogenic factors for proliferation.  Regulation of
the cell cycle is normally achieved by halting mitosis at various
checkpoints.  These checkpoints function to halt mitosis until the
proper signaling has occured to indicate that the cell should divide. 
The SV40 T-Ag acts at the first checkpoint of mitosis, removing the
necessity of mitogenic factor stimulation for proliferation.

The Rb protein functions to enforce a mitosis checkpoint (at the
transition from Growth phase 1, G1, and synthesis phase, S) by binding
to and inhibiting the action of E2F, a transcription factor necessary
for induction of mitosis.  Normally, growth factor receptors, upon
binding to their ligand, begin a signaling cascade that leads to the
phosphorylation of Rb.  When Rb becomes  phosphorylated it is
inactivated - when inactive, Rb releases E2F - free E2F is active and
is able to function as a transcription factor supporting mitosis.

SV40, by binding to Rb and interfering with its ability to bind to
E2F, inactivates the checkpoint function of Rb.  This decouples
mitosis from the necessity of growth factor stimulation.  Thus SV40
allows for uncontrolled cell growth by bypassing the checkpoint
function of Rb through it's inactivation.

In addition to the suggested links from the original answer - this
page provides a nice overview:
http://www.landesbioscience.com/journals/cellcycle/papersinpress/1.6/cc07250254.html

B)  Normally, Rb protein must be phosphorylated in order for it to
release E2F (from it's inactive, phosphorylated form).  This likely is
the result of a conformational change in Rb, such that when Rb is
phosphorylated, the binding to E2F is no longer favored.

Theoretically, T-Ag could lead to a dissociation of Rb:E2F either by
(1)increasing the phosphorylation of Rb or binding to the same
residues which are normally phosphorylated and producing a similar
conformational change in the protein, (2) by displacing E2F from it's
binding site on Rb, or (3) by binding to another region of Rb entirely
that leads to a conformational change which no longer favors Rb:E2F
association.  The question mentions that the phosphorylation domain
can be deleted without affecting Rb:T-Ag binding, meaning that T-Ag
must not bind directly to the residues involved in phosphorylation or
lead to phosphorylation of the protein.  The easiest answer to explain
how T-Ag then acheives it's effect would be through displacement of
E2F from it's binding site on Rb.

Either answer (2) or (3) could be investigated by expressing deletion
constructs of Rb and looking for binding to either T-Ag or E2F.  By
doing these experiments separately, one could map the binding sites
for both T-Ag and E2F on Rb.  If the binding sites are overlapping,
one could confirm the ability of T-Ag to displace E2F by first mixing
Rb and E2F, adding T-Ag and looking for binding to Rb - if T-Ag
displaces E2F, only T-Ag should be bound to Rb.  If the binding sites
are non-overlapping one would expect to find a deletion construct
which only would bind to E2F and not to T-Ag - in such a case,
addition of T-Ag to a mixture of this Rb deletion construct and E2F
would not lead to a decrease in binding between the construct and E2F.

Here is the web-page of someone who has carried out numerous similar
type experiments (listed in the left-hand column):
http://www.hmc.psu.edu/depts/old%20pages-kms%20save/micro/faculty/mtevethia.htm


Let me know if you need further information.
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