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Q: Fosmidomycin protocol ( Answered 5 out of 5 stars,   4 Comments )
Question  
Subject: Fosmidomycin protocol
Category: Science > Chemistry
Asked by: sciencegal-ga
List Price: $10.00
Posted: 23 Jul 2002 12:20 PDT
Expires: 22 Aug 2002 12:20 PDT
Question ID: 44223
What is the protocol for the synthesis of Fosmidomycin, the herbicide
antibiotic being studied for use in treating Malaria? I believe there
is a protocol by Hashimoto, but I cannot locate it.

Is Fosmidomycin available commercially to botanists as a pure
compound from vendors, not in a product such as Roundup?

Thanks!
Answer  
Subject: Re: Fosmidomycin protocol
Answered By: crabcakes-ga on 23 Jul 2002 15:15 PDT
Rated:5 out of 5 stars
 
sciencegal,
What an interesting topic this turned out to be! Fosmidomycin, as you
already know, is simply put, a phosphonic acid derivative, from a
species of streptomyces, which has antibacterial properties, and
apparently works as an anti-parasitic against  p.faciparum. I don't
think this is an ingredient of Roundup, the commercial weed killer,
unless it goes by a completely different name. Permethrin
(3-phenoxybenzyl(1RS)-cis,trans-3-(2,2-dichlorovinyl)-2,2-dimethylcyclopropanecarboxylate)comes
from chrysanthymum flowers and  is what is in  Roundup (It is still
toxic!).

I found two sites where you CAN order fosmidomycin, better known to
researchers as FR-31564 :
 http://www.probes.com/products/
They sell to Europe, Canada, and the US. You will, of course need an
account.
The second site that sells fosmidomycin is  Cambridge BioScience.
Their  site states you must be in the UK or Ireland. You could call   
+44 (0)1223 316855   and see if they have a manner of selling out of
the country, if necessary. There is also an online contact form in the
left column of the page. It is worth a try!
http://www.bioscience.co.uk/productinfo.asp?Catalogue_Number=F-23103

I could locate no studies, protocols, or paprers about this topic with
the name of  Hashimoto, but will list below all that I did find.
An abstract which mentions briefly how fosmidomycin is derived from
fermenting broth of Streptomyces lavendulae, by Okuhara M, Kuroda Y,
Goto T, Okamoto M, Terano H, Kohsaka M, Aoki H, Imanaka H.
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=PubMed&doptcmdl=Citation&term=J+Antibiot[TA]+AND+33[VI]+AND+24[PG]+AND+1980[DP]
Some pharmokinetics  in an orderable abstract by  Murakawa T, Soneoka
K, Konishi T
http://www.ncbi.nih.gov/htbin-post/Entrez/query_old?uid=4066075&form=6&db=m&Dopt=b

On the chemical  structure of fosmidomycin 
http://www.probes.com/servlets/structure?item=23103  

An abstract discussing the effects on the P. falciparum parasite
http://www.ncbi.nih.gov/htbin-post/Entrez/query_old?uid=10477522&form=6&db=m&Dopt=b

Another orderable abstract on the biosynthesis of fosmidomycin by
Mueller C, Schwender J, Zeidler J, Lichtenthaler HK.
http://www.ncbi.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=11171210&dopt=Abstract

A wee bit more, look for the second topic on the page;
http://www.probes.com/lit/bioprobes34/section14.html


This site, while missing some of it's graphics, briefly discusses the
effects of  fosamidomycin  on P.falciparum.
http://www.biologie.uni-hamburg.de/lehre/bza/molnews/malaria/malaria.htm

Another abstract on the pharmokinetics of fosmidomycin as an
antibiotic in rats and dogs.
http://www.ncbi.nih.gov/htbin-post/Entrez/query_old?uid=7067725&form=6&db=m&Dopt=b

An abstract on the synergystic effects of fosmidomycin and other
antibiotics.
http://www.ncbi.nih.gov/htbin-post/Entrez/query_old?uid=7181471&form=6&db=m&Dopt=b

Back in the days of covered wagons when I was in school, I had an
instructor who almost succeded in fooling me into thinking I was
looking at a p.falciparum, schizont (?) form. He had switched our
plasmodium slides with babesia slides! (In actuality, the only reason
I suspected something was amiss was the poor condition of the babesia
slides! We recently had had a patient in-house with p.falciparum, and
those slides were new and in good condition!)

Hope this helps you out. I will continue to search for Hashimoto's
protocol.

Best regards,
crabcakes

Request for Answer Clarification by sciencegal-ga on 24 Jul 2002 10:35 PDT
Thank you for the time you have given this.  Unfortunately, I have the
info you sent and was hoping for an actual protocol for synthesizing
this in a chem lab, sorry I was not more clear.

Thanks!
Sciencegal

Clarification of Answer by crabcakes-ga on 24 Jul 2002 16:35 PDT
Sorry, I will continue my search when I get home from work!

Clarification of Answer by crabcakes-ga on 24 Jul 2002 22:08 PDT
sciencegal- 

I have searched and searched without finding a syhthesis protocol for
fosmidomycin. It has been my experience that pharmaceutical companies
as well as independent researchers fiercely guard their newly
discovered drug data. Since Jomaa Pharmaka is still researching the
efficacy  and possible side effects of this drug, the chances of
finding it's synthesis are very slim. Are you certain you want the
synthesis of fosmidomycin and not the isoprenoid enzymes? I am
including another link below, for the synthesis of isoprenoid
enzymes.(Just in case)
I can still find nothing with the name of "Hashimoto". Do you have a
first name? Date of publication? Country of publication?

This site led me to the pathway of isoprenoid synthesis, which is
present in malaria parasites. The use of fosmidomycin inhibits the
path of these iosprenoid synthsis, just discovered in 1998.
http://www.jomaa-pharmaka.de/sites_english/start.php3?nav_code=ca
The pathway schematatics of isoprenoid synthesis are found here:
http://www.jomaa-pharmaka.de/sites_english/inhalt_english/abb_stoffwechselwege_e.htm
For a newly published report, from the Turkish Medline site (in
English) on fosmidomycin, read below. This site mentions the Jomaa
Pharmaka company, actively involved in research and development of
this new anti-malarial.
http://www.infeksiyon.org/Detail.asp?ctg=5&Article=644
The Nature MEdicine site also discusses fosmidomycin here:
http://www.nature.com/nm/special_focus/malaria/researchnews/mrb1.html
In the original question you asked for vendors where you could
purchase fosmidomycin. I supplied two, and I was wondering if you have
investigated these.Unless you own or work for a large pharmaceutical
laboratory, wouldn't it be best to purchase the fosmidomycin from a
laboratory that can certify the quality of the drug, especially if you
are intending to use it for your own research? If you were to
synthesize your own research drugs, you would have to prove HOW you
synthesized and quality controlled the drug for  your own research to
be valid.

I will be happy to furthur research the Hashimoto paper, if you could
kindly get me more information. Numerous searches have yielded nothing
to link fosmidomycin and Hashimoto.
Please advise.

crabcakes
search terms:
Hashimoto
fosmidomycin
FR-31564 
fosmidomycin protocol sysnthesis
malaria
streptomyces
and various permutations of the terms.
sciencegal-ga rated this answer:5 out of 5 stars
Thanks for all of your research and hard work!!

Comments  
Subject: Re: Fosmidomycin protocol
From: jlchem-ga on 27 Jul 2002 11:31 PDT
 
This reference is to a paper on the synthesis of related compounds. 
Note: unless you have experience in advanced organic synthetic methods
do not attempt.  One highlight of the synthesis is the Sharpless
Asymmetric Oxidation, which won him a Nobel prize.

E.Oehler, S.Kanzler, Regioselective Palladium(0) Catalyzed Amination
of Carbonates of Allylic Hydroxyphosphonates with Hydroxylamine
Derivatives.- A Convenient Route to Phosphonic Acids Related to the
Antibiotic Fosmidomycin, Synthesis 1995, 539-543.

Enjoy.
Subject: Re: Fosmidomycin protocol
From: sciencegal-ga on 27 Jul 2002 17:50 PDT
 
JL,

You are too cool!

Thanks so much!

Sciencegal
Subject: Re: Fosmidomycin protocol
From: jlchem-ga on 27 Jul 2002 18:24 PDT
 
Heh, thanks, I do what I can!
Subject: Re: Fosmidomycin protocol
From: loxodonta-ga on 16 May 2004 09:45 PDT
 
One very belated side comment to the original answer: The herbicide
"Roundup" is not composed of permethrin, but rather is the
isopropylamine salt of glyphosate.

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