Google Answers Logo
View Question
 
Q: Plasmids ( No Answer,   2 Comments )
Question  
Subject: Plasmids
Category: Science > Biology
Asked by: tedmccall-ga
List Price: $20.00
Posted: 24 Apr 2005 11:51 PDT
Expires: 24 May 2005 11:51 PDT
Question ID: 513555
What is a physical map of a plasmid use for in the bacterial
expression of a mitochondrial Cytochrome C. I just want to know what
is going on. Pafalafa-ga.

                                Ted.

Request for Question Clarification by pafalafa-ga on 24 Apr 2005 15:59 PDT
Hello Ted,

I just noticed this question...thanks so much for directing it to me.

I don't really know the answer off the top of my head, but I will poke
around and see if I can find some insights for you on this topic.  It
may be a few days before I can get back to you to let you know what I
(if anything) I've found.

Stay tuned...


paf
Answer  
There is no answer at this time.

Comments  
Subject: Re: Plasmids
From: dops-ga on 25 Apr 2005 11:07 PDT
 
You mean one of the hundred or so vectors that can be used for
bacterial expression. You might want to narrow it down a bit.
Subject: Re: Plasmids
From: theoracleofdelphi-ga on 20 May 2005 17:51 PDT
 
For modern biology, people often want to generate multiple copies of
certain DNA sequences in the lab, so they can analyze these sequences
in detail or use them to construct other pieces of DNA or express the
DNA in some organism in order to make RNA or protein.  The handiest
way to generate extra DNA is by 'cloning' it, which in the molecular
biology world means 'making extra copies of DNA'.  The easiest way to
do this is to put the DNA into bacteria.  As the bacteria multiply
(which they do every few minutes, which is why you should go clean
your toilet seat NOW), they also copy the DNA, which means you end up
with more DNA.  For a bacteria to be fooled into thinking the DNA is
its own, and therefore copy (we actually say 'replicate') it, the DNA
needs to be in a certain form: a circular piece of DNA with sites
where replication can start and some other stuff.  This form of the
DNA is called a 'plasmid'.  If the plasmid has certain required
sequences that fool the bacteria into not only copying the DNA, but
transcribing parts of it into RNA and translating those into protein,
then the plasmid is suitable for 'expression' of the DNA.  So if you
have some DNA encoding mitochondrial cytochrome C (an enzyme important
for energy production in cells), and you want to (for example) study a
bunch of the protein, you could stick the cytochrome C gene into an
expression plasmid and grow the bacteria in a big flask of nutrient
stuff that bacteria like to live in ('broth') and they would be
happily producing cytochrome C protein for you.  Cool, eh?  Of course,
to do this, you need to be able to stick your cytochrome C gene into
the right place in the plasmid, which requires that you know where
origin of replication and promoters and restriction enzyme sites and
all the other information you'll need to know is.  And the best way to
know how all that stuff is organized is if you simply have a drawing
of the plasmid.  Only we scientists don't sound so cool when we refer
to 'drawings' of 'circular bits of DNA like those found in bacteria',
so instead we refer to those drawings as 'physical maps' of 'plasmids'

You can type 'plasmid maps' into Google and get hits like this: 

http://www.stanford.edu/group/nolan/plasmid_maps/pmaps.html
http://www.premierbiosoft.com/plasmid_maps/glossary/plasmid_maps.html

That shows you what they look like.

And here is a decent description of the stuff I talked about, from a
Google search of 'DNA cloning bacterial expression':

http://users.rcn.com/jkimball.ma.ultranet/BiologyPages/R/RecombinantDNA.html

Hope this answers your question.  I just couldn't stand to see
Pafalafa collect any more money from simple bogus Google searches that
most questioners could have done themselves.  Since I am not a
registered 'answerer', you can't pay me (which is fine).  But don't
pay anyone else unless he/she really comes up with something useful --
more useful than rephrasing a freaking Google search.  There is lots
more to learn about the topic you ask about, and someone could spend a
lot more time explaining the mechanics of cloning.  You could try
searching some textbooks.  The greatest online repository of
biomedical texts online can be found at:
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=Books
This is your tax money at work, not just for geeky scientists.  Try it out.

Important Disclaimer: Answers and comments provided on Google Answers are general information, and are not intended to substitute for informed professional medical, psychiatric, psychological, tax, legal, investment, accounting, or other professional advice. Google does not endorse, and expressly disclaims liability for any product, manufacturer, distributor, service or service provider mentioned or any opinion expressed in answers or comments. Please read carefully the Google Answers Terms of Service.

If you feel that you have found inappropriate content, please let us know by emailing us at answers-support@google.com with the question ID listed above. Thank you.
Search Google Answers for
Google Answers  


Google Home - Answers FAQ - Terms of Service - Privacy Policy